[sheet: Closing Checklist]
Item No. | Document Description | Responsible Party | Due Date | Status | Notes
1 | Note Purchase Agreement (execution version) — dated September 12, 2025, among Genome Dx Therapeutics Inc. and the Purchasers, governing the issuance and sale of convertible promissory notes in aggregate principal amount of $8,000,000 | Calderwood & Harkness LLP (drafting); Ashford, Blake & Tan LLP (review on behalf of Purchasers) | September 12, 2025 | Final / Executed | Governed by Delaware law. Four Purchasers: Dr. Lena Vasquez, Dr. Franklin Osei, James Calloway, and Stonebridge Capital Partners Fund III, L.P. Includes Exhibits A (Form of Note) and B (Schedule of Purchasers). Securities exempt under Section 4(a)(2) and Rule 506(b) of Regulation D.
2 | Convertible Promissory Notes (4 notes) — Exhibit A to the NPA, individual notes issued to each Purchaser | Calderwood & Harkness LLP (drafting); executed by Company officers Marcus Eaton (CFO) and Priya Raghavan (General Counsel) | September 12, 2025 | Final / Executed | Note 1: Dr. Lena Vasquez — $1,500,000; Note 2: Dr. Franklin Osei — $500,000; Note 3: James Calloway — $1,000,000; Note 4: Stonebridge Capital Partners Fund III, L.P. — $5,000,000. Interest rate: 7.00% per annum (700 bps), simple interest, 365-day year. Maturity: March 12, 2027 (18 months). Automatic conversion upon Qualified Financing (≥$25,000,000 gross proceeds) at lesser of 20% discount or $95,000,000 valuation cap price (~$0.8422/share). Optional conversion at maturity into Series B-1 Preferred at cap price. Change of Control: 2.0× principal plus accrued interest or conversion. Unsecured; subordinated to up to $3,000,000 senior indebtedness.
3 | Schedule of Purchasers (Exhibit B to NPA) | Calderwood & Harkness LLP | September 12, 2025 | Final | Lists purchaser names, addresses, and commitment amounts. (1) Dr. Lena Vasquez, 2288 La Jolla Scenic Drive, La Jolla, CA 92037 — $1,500,000; (2) Dr. Franklin Osei, 815 Prospect Street, Unit 4A, La Jolla, CA 92037 — $500,000; (3) James Calloway, 390 Park Avenue, 18th Floor, New York, NY 10022 — $1,000,000; (4) Stonebridge Capital Partners Fund III, L.P., 390 Park Avenue, 18th Floor, New York, NY 10022 — $5,000,000. Aggregate: $8,000,000.
4 | Action by Written Consent of the Board of Directors of Genome Dx Therapeutics Inc. — dated September 11, 2025 | Calderwood & Harkness LLP (drafting); GenomeDx Board (execution) | September 11, 2025 | Executed | Approved by disinterested directors Nadia Chowdhury and Dr. Renata Moss (2 of 2 disinterested directors). Interested directors Dr. Lena Vasquez, Dr. Franklin Osei, and James Calloway recused. Authorizes issuance of $8,000,000 convertible notes, execution of NPA and ancillary documents. Authorizes Marcus Eaton (CFO) and Priya Raghavan (General Counsel) to execute on behalf of the Company.
5 | Written Consent of Holders of Series B Preferred Stock — Consent to Debt Incurrence >$2,000,000 (per Series B IRA dated August 15, 2023) | Ashford, Blake & Tan LLP (coordination); Stonebridge Capital Partners Fund III, L.P. (execution) | September 10, 2025 | Executed | Executed by James Calloway as Managing Partner of Stonebridge Capital Management III LLC, general partner of Stonebridge Capital Partners Fund III, L.P. Stonebridge holds 18,900,000 of 31,400,000 Series B Preferred shares (~60.2%), constituting majority consent. Consents to incurrence of $8,000,000 convertible note indebtedness.
6 | Written Consent of Holders of Series A Preferred Stock — Consent to Debt Incurrence >$5,000,000 (per Series A IRA dated March 22, 2021) | Ashford, Blake & Tan LLP / Calderwood & Harkness LLP (coordination); Whitepine Ventures Fund II, L.P. (execution) | September 10, 2025 | Executed | Executed by Nadia Chowdhury as Managing Director of Whitepine Ventures Management LLC, general partner of Whitepine Ventures Fund II, L.P. Whitepine holds 15,800,000 of 22,600,000 Series A Preferred shares (~69.9%), constituting majority consent. Consents to incurrence of $8,000,000 convertible note indebtedness. Whitepine is not a noteholder in this transaction.
7 | Secretary's Certificate of Genome Dx Therapeutics Inc. — dated September 12, 2025 | Priya Raghavan (General Counsel and Assistant Secretary), GenomeDx | September 12, 2025 | Executed | Certifies: (i) Certificate of Incorporation (as amended) and Bylaws are true and complete (attached); (ii) Board written consent dated September 11, 2025 duly adopted; (iii) incumbency and specimen signatures of authorized officers (Marcus Eaton, CFO; Priya Raghavan, General Counsel); (iv) good standing in Delaware. Delivered as condition to Purchasers' funding obligation.
7A | Attachment to Secretary's Certificate — Certificate of Incorporation (as amended) | GenomeDx | September 12, 2025 | Attached | Delaware corporation; incorporated 2018. EIN: 84-3921076. Registered Agent: Pacific Corporate Services Inc., 1209 Orange Street, Wilmington, DE 19801.
7B | Attachment to Secretary's Certificate — Bylaws | GenomeDx | September 12, 2025 | Attached | Current bylaws of Genome Dx Therapeutics Inc.
7C | Attachment to Secretary's Certificate — Board Written Consent (Sept. 11, 2025) | GenomeDx | September 12, 2025 | Attached | Copy of Item 4 above.
7D | Attachment to Secretary's Certificate — Good Standing Certificate (Delaware) | Secretary of State, State of Delaware | September 12, 2025 | Received | Certificate of good standing for Genome Dx Therapeutics Inc. from Delaware Secretary of State.
8 | Legal Opinion of Calderwood & Harkness LLP — dated September 12, 2025 | Calderwood & Harkness LLP (Howard Quinn, Responsible Partner) | September 12, 2025 | Delivered | Addressed to the Purchasers. Opines: (1) GDT duly incorporated, validly existing, in good standing in Delaware; (2) NPA and Notes duly authorized, executed, delivered, valid and binding (subject to customary bankruptcy/equitable/public policy exceptions); (3) issuance does not violate Certificate of Incorporation, Bylaws, or Delaware law; (4) Preferred Stock issuable upon conversion duly reserved and, when issued, will be validly issued, fully paid, non-assessable.
9 | Wire Transfer Instructions and Confirmation of Receipt of Funds | Calderwood & Harkness LLP (preparation of instructions memo); GenomeDx / Marcus Eaton (confirmation of receipt) | September 12, 2025 | Funds Received / Confirmed | Four incoming wires totaling $8,000,000 to Genome Dx Therapeutics Inc. operating account. (1) Dr. Lena Vasquez — $1,500,000; (2) Dr. Franklin Osei — $500,000; (3) James Calloway — $1,000,000; (4) Stonebridge Capital Partners Fund III, L.P. — $5,000,000. No escrow arrangement. Confirmation of receipt is a condition to delivery of the Notes. Company HQ: 4710 Torrey Pines Road, Suite 300, San Diego, CA 92130.
10 | Accredited Investor Questionnaires (4 purchasers) | Ashford, Blake & Tan LLP (coordination with Purchasers); Calderwood & Harkness LLP (review) | September 12, 2025 | Received (all 4) | Questionnaires completed by: (1) Dr. Lena Vasquez; (2) Dr. Franklin Osei; (3) James Calloway; (4) Stonebridge Capital Partners Fund III, L.P. (Delaware LP; EIN 87-2104538; GP: Stonebridge Capital Management III LLC). All 4 purchasers confirmed as accredited investors. No general solicitation. Exemption: Section 4(a)(2) and Rule 506(b) of Regulation D.
11 | Compliance Certificate | GenomeDx / Marcus Eaton (CFO) | September 12, 2025 | Executed | Officer's certificate confirming Company's compliance with conditions to closing, accuracy of representations and warranties, and no material adverse change. Confirms Company's capitalization: ~48.2M common shares, 22.6M Series A Preferred shares, 31.4M Series B Preferred shares, fully diluted ~112,800,000 shares. 409A FMV: $1.18/share common (as of June 30, 2025, per Ridgeline Valuation Partners LLC).
[sheet: Key Transaction Summary]
Field | Value
Transaction | Convertible Promissory Note Financing (Bridge to Series C)
Issuer | Genome Dx Therapeutics Inc., a Delaware corporation
Issuer HQ | 4710 Torrey Pines Road, Suite 300, San Diego, CA 92130
Issuer EIN | 84-3921076
Aggregate Principal Amount | $8,000,000
Number of Notes | 4
Interest Rate | 7.00% per annum (700 bps), simple interest, 365-day year
Maturity Date | March 12, 2027 (18 months from issuance)
Valuation Cap | $95,000,000 (pre-money)
Discount | 20% (conversion at 80% of Qualified Financing price)
Qualified Financing Threshold | $25,000,000 minimum gross proceeds (excluding note conversion)
Cap Price Per Share (illustrative) | ~$0.8422 ($95,000,000 ÷ 112,800,000 fully diluted shares)
Closing Date | September 12, 2025
Governing Law | State of Delaware
Securities Exemption | Section 4(a)(2) of the Securities Act of 1933; Rule 506(b) of Regulation D
Issuer's Counsel | Calderwood & Harkness LLP, 555 Mission Street, Suite 3200, San Francisco, CA 94105
C&H Matter Number | 1013-00003
C&H Engagement Team | Howard Quinn (Responsible Partner); Patricia Dunmore (Billing Partner); Wendy Schultz (Lead Associate); Omar Siddiqui (Working Associate)
Noteholders' Counsel | Ashford, Blake & Tan LLP, 1999 Avenue of the Stars, Suite 2700, Los Angeles, CA 90067 — Daniel Nakamura (Partner), Stephanie Forrest (Associate)
Company Auditor | Carver & Hollis LLP, 101 Second Street, Suite 1800, San Francisco, CA 94105 — Rachel Dimitriou, CPA
409A Valuation Firm | Ridgeline Valuation Partners LLC — Thomas Greenfield, ASA; $1.18/share common as of June 30, 2025
Transfer Agent | Meridian Transfer Services Inc., 44 Wall Street, 6th Floor, New York, NY 10005
Delaware Registered Agent | Pacific Corporate Services Inc., 1209 Orange Street, Wilmington, DE 19801
Prepared By | Omar Siddiqui, Calderwood & Harkness LLP
[sheet: Purchaser Details]
Purchaser No. | Purchaser Name | Role / Relationship to Issuer | Entity Type | Address | Note Commitment Amount | Percentage of Aggregate Principal | Interested Director? | Accredited Investor Questionnaire Received
1 | Dr. Lena Vasquez, Ph.D. | CEO, Co-Founder, Director of GenomeDx | Individual | 2288 La Jolla Scenic Drive, La Jolla, CA 92037 | $1,500,000 | 18.75% | Yes — recused from Board vote | Yes
2 | Dr. Franklin Osei, Ph.D. | CSO, Co-Founder, Director of GenomeDx | Individual | 815 Prospect Street, Unit 4A, La Jolla, CA 92037 | $500,000 | 6.25% | Yes — recused from Board vote | Yes
3 | James Calloway | Managing Partner, Stonebridge Capital Partners; Series B Board Director of GenomeDx | Individual | 390 Park Avenue, 18th Floor, New York, NY 10022 | $1,000,000 | 12.50% | Yes — recused from Board vote | Yes
4 | Stonebridge Capital Partners Fund III, L.P. | Series B lead investor; affiliated with James Calloway; GP: Stonebridge Capital Management III LLC; EIN: 87-2104538 | Delaware limited partnership | 390 Park Avenue, 18th Floor, New York, NY 10022 | $5,000,000 | 62.50% | N/A (entity; Calloway recused as affiliated director) | Yes
TOTAL | All Purchasers (4) | — | — | — | $8,000,000 | 100.00% | — | All 4 Received